What happens to your gut microbiome during antibiotic therapy and recovery
How antibiotics affect your microbiomeAntibiotics save lives by killing or inhibiting bacteria, but they are rarely selective only for pathogens. They reduce gut microbial diversity, shift relative abundances, and can expand antibiotic-resistance genes. Common consequences include antibiotic-associated diarrhea (AAD), overgrowth of opportunistic pathogens such as Clostridioides difficile, altered immune signaling, and metabolic changes. The magnitude of disruption depends on the antibiotic class, dose, duration, and the individual’s baseline microbiome and health status.How long recovery takesRecovery timelines vary:Short programs (1–7 days) frequently yield quantifiable shifts within days, whereas diversity and numerous taxa generally start recovering in weeks.Numerous investigations document partial bounce-back…
